dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001368_1|CGC2
Gene ID: MGYG000001368_00318
Location and strand information: 382114 - 383613 (+)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 5.1354
Protein molecular weight: 56861.49
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001368_1|CGC2
Gene ID: MGYG000001368_00319
Location and strand information: 383698 - 384666 (+)
Family: GH43|GH43_26|CBM42
Protein type: CAZyme
Protein description: Extracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 5.0425
Protein molecular weight: 37671.26
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001368_1|CGC2
Gene ID: MGYG000001368_00320
Location and strand information: 384689 - 385999 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: Multiple sugar-binding protein

Gene clsuter ID: MGYG000001368_1|CGC2
Gene ID: MGYG000001368_00321
Location and strand information: 386066 - 386944 (+)
Family: 3.A.1.1.42
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000001368_1|CGC2
Gene ID: MGYG000001368_00322
Location and strand information: 386944 - 387759 (+)
Family: 3.A.1.1.45
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001368_1|CGC2
Gene ID: MGYG000001368_00323
Location and strand information: 387837 - 389291 (+)
Family: GH29
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.695
Protein molecular weight: 56484.56
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001368_1|CGC2
Gene ID: MGYG000001368_00324
Location and strand information: 389458 - 391191 (+)
Family: 9.B.33.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001368_1|CGC2
Gene ID: MGYG000001368_00325
Location and strand information: 391188 - 392660 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000001368_1|CGC2
Gene ID: MGYG000001368_00326
Location and strand information: 392948 - 393676 (+)
Family: 9.B.120.1.3
Protein type: TC
Protein description: putative membrane protein YdfK

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001368_00318	Intracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	382114	383613	+	GH51
MGYG000001368_00319	Extracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	383698	384666	+	GH43\| GH43_26\| CBM42
MGYG000001368_00320	Multiple sugar-binding protein	STP	384689	385999	+	SBP_bac_1
MGYG000001368_00321	Lactose transport system permease protein LacF	TC	386066	386944	+	3.A.1.1.42
MGYG000001368_00322	L-arabinose transport system permease protein AraQ	TC	386944	387759	+	3.A.1.1.45
MGYG000001368_00323	hypothetical protein	CAZyme	387837	389291	+	GH29
MGYG000001368_00324	hypothetical protein	TC	389458	391191	+	9.B.33.1.1
MGYG000001368_00325	HTH-type transcriptional activator RhaR	TF	391188	392660	+	HTH_AraC+HTH_AraC
MGYG000001368_00326	putative membrane protein YdfK	TC	392948	393676	+	9.B.120.1.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature